STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rru_A2005Glutaryl-CoA dehydrogenase. (395 aa)    
Predicted Functional Partners:
Rru_A3801
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.969
Rru_A1834
Enoyl-CoA hydratase/isomerase.
 
 0.964
Rru_A3078
Electron transfer flavoprotein.
 
 0.964
Rru_A1310
Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.953
Rru_A2266
Electron transfer flavoprotein.
 
 
 0.929
Rru_A0049
Biotin/lipoyl attachment.
  
 0.923
Rru_A1214
2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
   
 0.914
Rru_A1215
Dihydrolipoamide dehydrogenase.
  
 0.914
Rru_A1878
Dihydrolipoamide dehydrogenase.
  
 0.914
Rru_A1309
3-hydroxyacyl-CoA dehydrogenase.
  
 0.912
Your Current Organism:
Rhodospirillum rubrum
NCBI taxonomy Id: 269796
Other names: R. rubrum ATCC 11170, Rhodospirillum rubrum ATCC 11170, Rhodospirillum rubrum S1, Rhodospirillum rubrum str. ATCC 11170, Rhodospirillum rubrum strain ATCC 11170
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