Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Rru_A2016Conserved hypothetical protein. (112 aa)    
Predicted Functional Partners:
Rru_A2015
Chaperone DnaJ.
 
 
 0.953
Rru_A2626
Chaperone DnaJ.
 
 
 0.557
Rru_A1500
Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
   
 
 0.552
Rru_A2361
Multi-sensor hybrid histidine kinase.
   
 
 0.509
Rru_A0713
Protein of unknown function DUF833.
  
     0.488
Rru_A3739
Hypothetical protein.
  
     0.480
Rru_A0684
Conserved hypothetical protein.
  
     0.472
Rru_A2079
L-glutamine synthetase.
 
 
 0.466
Rru_A1252
L-glutamine synthetase.
 
 
 0.464
Rru_A0151
Hypothetical protein.
 
    0.443
Your Current Organism:
Rhodospirillum rubrum
NCBI taxonomy Id: 269796
Other names: R. rubrum ATCC 11170, Rhodospirillum rubrum ATCC 11170, Rhodospirillum rubrum S1, Rhodospirillum rubrum str. ATCC 11170, Rhodospirillum rubrum strain ATCC 11170
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