STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rru_A2346Hypothetical protein. (300 aa)    
Predicted Functional Partners:
Rru_A2345
Glycosyl transferase, group 1.
 
     0.936
Rru_A2349
Hypothetical protein.
 
     0.854
Rru_A2348
Glycosyl transferase.
 
     0.851
Rru_A2351
Macrocin-O-methyltransferase.
  
     0.751
Rru_A2350
Methylase involved in ubiquinone/menaquinone biosynthesis-like.
  
     0.739
Rru_A2347
Hypothetical protein.
       0.638
Rru_A2344
Hypothetical protein.
       0.580
Rru_A0885
TonB-dependent siderophore receptor.
  
     0.537
Rru_A2353
Tetratricopeptide TPR_4.
 
     0.501
Rru_A1492
Hypothetical protein.
 
     0.460
Your Current Organism:
Rhodospirillum rubrum
NCBI taxonomy Id: 269796
Other names: R. rubrum ATCC 11170, Rhodospirillum rubrum ATCC 11170, Rhodospirillum rubrum S1, Rhodospirillum rubrum str. ATCC 11170, Rhodospirillum rubrum strain ATCC 11170
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.