STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rru_A2475Glycine betaine/L-proline transport ATP-binding subunit. (399 aa)    
Predicted Functional Partners:
Rru_A2476
Binding-protein-dependent transport systems inner membrane component.
 0.999
ProX
Substrate-binding region of ABC-type glycine betaine transport system.
 
 0.999
Rru_A1920
ABC transporter component.
 
     
0.893
nikD
ABC transporter component; Part of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Nickel importer (TC 3.A.1.5.3) family.
 
     
0.867
Rru_A0882
ABC transporter, transmembrane region.
 
     
0.856
Rru_A0703
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
    
 0.741
Rru_A2384
Binding-protein-dependent transport systems inner membrane component.
  
 0.712
Rru_A2382
Binding-protein-dependent transport systems inner membrane component.
  
 0.709
Rru_A1790
ABC-2 transporter component.
 
      0.609
Rru_A3129
ABC-2 transporter component.
 
      0.603
Your Current Organism:
Rhodospirillum rubrum
NCBI taxonomy Id: 269796
Other names: R. rubrum ATCC 11170, Rhodospirillum rubrum ATCC 11170, Rhodospirillum rubrum S1, Rhodospirillum rubrum str. ATCC 11170, Rhodospirillum rubrum strain ATCC 11170
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.