Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| Rru_A0098 | Rru_A2570 | Cystathionine gamma-synthase. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.901 |
| Rru_A0963 | Rru_A2569 | MifU-like protein, Fe-S cluster formation. | Protein of unknown function DUF59. | 0.818 |
| Rru_A0963 | Rru_A2570 | MifU-like protein, Fe-S cluster formation. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.965 |
| Rru_A0963 | Rru_A2571 | MifU-like protein, Fe-S cluster formation. | FeS assembly protein SufD. | 0.857 |
| Rru_A0963 | Rru_A2572 | MifU-like protein, Fe-S cluster formation. | FeS assembly ATPase SufC. | 0.917 |
| Rru_A0963 | Rru_A2573 | MifU-like protein, Fe-S cluster formation. | Iron-regulated ABC transporter membrane component SufB. | 0.864 |
| Rru_A2281 | Rru_A2569 | NifQ. | Protein of unknown function DUF59. | 0.633 |
| Rru_A2281 | Rru_A2570 | NifQ. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.935 |
| Rru_A2281 | Rru_A2571 | NifQ. | FeS assembly protein SufD. | 0.752 |
| Rru_A2281 | Rru_A2572 | NifQ. | FeS assembly ATPase SufC. | 0.863 |
| Rru_A2281 | Rru_A2573 | NifQ. | Iron-regulated ABC transporter membrane component SufB. | 0.752 |
| Rru_A2569 | Rru_A0963 | Protein of unknown function DUF59. | MifU-like protein, Fe-S cluster formation. | 0.818 |
| Rru_A2569 | Rru_A2281 | Protein of unknown function DUF59. | NifQ. | 0.633 |
| Rru_A2569 | Rru_A2570 | Protein of unknown function DUF59. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.990 |
| Rru_A2569 | Rru_A2571 | Protein of unknown function DUF59. | FeS assembly protein SufD. | 0.974 |
| Rru_A2569 | Rru_A2572 | Protein of unknown function DUF59. | FeS assembly ATPase SufC. | 0.982 |
| Rru_A2569 | Rru_A2573 | Protein of unknown function DUF59. | Iron-regulated ABC transporter membrane component SufB. | 0.976 |
| Rru_A2569 | Rru_A3475 | Protein of unknown function DUF59. | Cysteine desulfuration protein SufE. | 0.840 |
| Rru_A2570 | Rru_A0098 | Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | Cystathionine gamma-synthase. | 0.901 |
| Rru_A2570 | Rru_A0963 | Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | MifU-like protein, Fe-S cluster formation. | 0.965 |
page 1 of 3