STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rru_A2571FeS assembly protein SufD. (447 aa)    
Predicted Functional Partners:
Rru_A2572
FeS assembly ATPase SufC.
 
 0.999
Rru_A2573
Iron-regulated ABC transporter membrane component SufB.
 
 0.999
Rru_A2570
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.998
Rru_A2569
Protein of unknown function DUF59.
   
 0.974
Rru_A2568
HesB/YadR/YfhF; Belongs to the HesB/IscA family.
  
 
 0.898
Rru_A0963
MifU-like protein, Fe-S cluster formation.
 
  
 0.857
Rru_A3475
Cysteine desulfuration protein SufE.
 
 
 0.853
Rru_A3040
Aminotransferase, class V.
  
 
 0.795
Rru_A2281
NifQ.
  
  
 0.752
Rru_A2574
Transcriptional regulator, BadM/Rrf2 family.
 
   
 0.732
Your Current Organism:
Rhodospirillum rubrum
NCBI taxonomy Id: 269796
Other names: R. rubrum ATCC 11170, Rhodospirillum rubrum ATCC 11170, Rhodospirillum rubrum S1, Rhodospirillum rubrum str. ATCC 11170, Rhodospirillum rubrum strain ATCC 11170
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.