STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rru_A2604Diguanylate cyclase/phosphodiesterase. (678 aa)    
Predicted Functional Partners:
Rru_A0131
Response regulator receiver (CheY) and unknown domain protein.
 
 
    0.863
Rru_A2361
Multi-sensor hybrid histidine kinase.
 
 0.732
Rru_A0554
Rh-like protein/ammonium transporter.
 
      0.687
Rru_A3230
Diguanylate cyclase/phosphodiesterase.
 
 
 0.670
Rru_A3180
Metal dependent phosphohydrolase.
  
 0.642
Rru_A3560
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
 
0.604
Rru_A0102
Putative diguanylate cyclase (GGDEF domain).
 
0.584
Rru_A2406
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
 
0.570
Rru_A1277
Hpt sensor hybrid histidine kinase.
  
 0.561
Rru_A3478
Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain.
 
0.560
Your Current Organism:
Rhodospirillum rubrum
NCBI taxonomy Id: 269796
Other names: R. rubrum ATCC 11170, Rhodospirillum rubrum ATCC 11170, Rhodospirillum rubrum S1, Rhodospirillum rubrum str. ATCC 11170, Rhodospirillum rubrum strain ATCC 11170
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