STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rru_A2742O-linked N-acetylglucosamine transferase SPINDLY family-like. (514 aa)    
Predicted Functional Partners:
Rru_A2745
Conserved hypothetical protein.
 
     0.838
Rru_A2746
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
       0.786
Rru_A2738
Glycosyl transferase, group 1.
     
 0.784
Rru_A2744
Conserved hypothetical protein.
       0.783
Rru_A2743
Radical SAM.
       0.775
Rru_A0551
TPR domain protein.
 
 
 0.734
Rru_A2859
Conserved hypothetical protein.
 
     0.667
Rru_A2920
Conserved hypothetical protein.
  
     0.657
Rru_A0133
Glycosyl transferase, group 1.
     
 0.565
Rru_A0229
Glycosyl transferase, group 1.
     
 0.565
Your Current Organism:
Rhodospirillum rubrum
NCBI taxonomy Id: 269796
Other names: R. rubrum ATCC 11170, Rhodospirillum rubrum ATCC 11170, Rhodospirillum rubrum S1, Rhodospirillum rubrum str. ATCC 11170, Rhodospirillum rubrum strain ATCC 11170
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.