Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| FlgA | FliG | Rru_A2844 | Rru_A0544 | Flageller protein FlgA. | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.966 |
| FlgA | Rru_A2279 | Rru_A2844 | Rru_A2279 | Flageller protein FlgA. | ATP-binding region, ATPase-like. | 0.813 |
| FlgA | Rru_A2529 | Rru_A2844 | Rru_A2529 | Flageller protein FlgA. | Protein of unknown function DUF1078. | 0.925 |
| FlgA | Rru_A2534 | Rru_A2844 | Rru_A2534 | Flageller protein FlgA. | Flagellin-like; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.616 |
| FlgA | Rru_A2846 | Rru_A2844 | Rru_A2846 | Flageller protein FlgA. | Hypothetical protein. | 0.645 |
| FlgA | Rru_A2852 | Rru_A2844 | Rru_A2852 | Flageller protein FlgA. | Conserved hypothetical protein; Belongs to the flagella basal body rod proteins family. | 0.894 |
| FlgA | Rru_A2857 | Rru_A2844 | Rru_A2857 | Flageller protein FlgA. | Flagellar FlbT. | 0.798 |
| FlgA | Rru_A2858 | Rru_A2844 | Rru_A2858 | Flageller protein FlgA. | Flagellin-like; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.820 |
| FlgA | Rru_A3292 | Rru_A2844 | Rru_A3292 | Flageller protein FlgA. | Hypothetical protein. | 0.870 |
| FlgA | flgH | Rru_A2844 | Rru_A2845 | Flageller protein FlgA. | Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.995 |
| FliG | FlgA | Rru_A0544 | Rru_A2844 | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Flageller protein FlgA. | 0.966 |
| FliG | Rru_A2279 | Rru_A0544 | Rru_A2279 | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | ATP-binding region, ATPase-like. | 0.926 |
| FliG | Rru_A2529 | Rru_A0544 | Rru_A2529 | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Protein of unknown function DUF1078. | 0.953 |
| FliG | Rru_A2534 | Rru_A0544 | Rru_A2534 | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Flagellin-like; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.895 |
| FliG | Rru_A2846 | Rru_A0544 | Rru_A2846 | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Hypothetical protein. | 0.706 |
| FliG | Rru_A2852 | Rru_A0544 | Rru_A2852 | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Conserved hypothetical protein; Belongs to the flagella basal body rod proteins family. | 0.964 |
| FliG | Rru_A2857 | Rru_A0544 | Rru_A2857 | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Flagellar FlbT. | 0.884 |
| FliG | Rru_A2858 | Rru_A0544 | Rru_A2858 | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Flagellin-like; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.835 |
| FliG | Rru_A3292 | Rru_A0544 | Rru_A3292 | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Hypothetical protein. | 0.821 |
| FliG | flgH | Rru_A0544 | Rru_A2845 | Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation. | 0.993 |
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