STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rru_A2859Conserved hypothetical protein. (784 aa)    
Predicted Functional Partners:
Rru_A0106
TPR repeat, Tetratricopeptide TPR_4.
 
 
 0.802
Rru_A2348
Glycosyl transferase.
 
 
 0.705
Rru_A2862
Alpha/beta hydrolase fold.
  
 
 0.696
Rru_A1173
TPR repeat.
 
 0.684
Rru_A2742
O-linked N-acetylglucosamine transferase SPINDLY family-like.
 
     0.667
Rru_A0551
TPR domain protein.
 
 0.666
Rru_A2861
Hypothetical protein.
       0.665
Rru_A2860
Hypothetical protein.
       0.655
Rru_A1817
TPR repeat.
 
 
 0.645
Rru_A0550
TPR repeat.
 
 
 0.637
Your Current Organism:
Rhodospirillum rubrum
NCBI taxonomy Id: 269796
Other names: R. rubrum ATCC 11170, Rhodospirillum rubrum ATCC 11170, Rhodospirillum rubrum S1, Rhodospirillum rubrum str. ATCC 11170, Rhodospirillum rubrum strain ATCC 11170
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.