STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rru_A2907Anti-Sigma-factor antagonist (STAS) domain protein. (111 aa)    
Predicted Functional Partners:
Rru_A2279
ATP-binding region, ATPase-like.
  
 
 0.974
Rru_A2910
Mammalian cell entry related.
 
   0.961
Rru_A2909
ABC transporter component.
 
 
   0.957
Rru_A2361
Multi-sensor hybrid histidine kinase.
 
  
 0.942
Rru_A2908
Protein of unknown function DUF140.
 
 
   0.942
Rru_A0099
Serine phosphatase.
  
 
 0.906
Rru_A1277
Hpt sensor hybrid histidine kinase.
  
  
 0.852
Rru_A2108
Hpt sensor hybrid histidine kinase.
  
  
 0.852
Rru_A2850
Hypothetical protein.
   
    0.823
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
    0.816
Your Current Organism:
Rhodospirillum rubrum
NCBI taxonomy Id: 269796
Other names: R. rubrum ATCC 11170, Rhodospirillum rubrum ATCC 11170, Rhodospirillum rubrum S1, Rhodospirillum rubrum str. ATCC 11170, Rhodospirillum rubrum strain ATCC 11170
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