STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rru_A30793-hydroxyacyl-CoA dehydrogenase. (290 aa)    
Predicted Functional Partners:
Rru_A3801
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.998
Rru_A3387
Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.995
Rru_A0274
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.994
Rru_A1380
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.993
Rru_A1469
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.993
Rru_A2240
Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.993
Rru_A1946
Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.992
Rru_A2506
Enoyl-CoA hydratase / short chain enoyl-CoA hydratase.
 0.989
Rru_A1310
Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.986
Rru_A2156
Short chain enoyl-CoA hydratase.
 0.978
Your Current Organism:
Rhodospirillum rubrum
NCBI taxonomy Id: 269796
Other names: R. rubrum ATCC 11170, Rhodospirillum rubrum ATCC 11170, Rhodospirillum rubrum S1, Rhodospirillum rubrum str. ATCC 11170, Rhodospirillum rubrum strain ATCC 11170
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