Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NikC | Rru_A3169 | Rru_A2275 | Rru_A3169 | Binding-protein-dependent transport systems inner membrane component. | ABC transporter component; Belongs to the ABC transporter superfamily. | 0.881 |
Rru_A0590 | Rru_A3169 | Rru_A0590 | Rru_A3169 | Binding-protein-dependent transport systems inner membrane component. | ABC transporter component; Belongs to the ABC transporter superfamily. | 0.899 |
Rru_A0801 | Rru_A3169 | Rru_A0801 | Rru_A3169 | Binding-protein-dependent transport systems inner membrane component. | ABC transporter component; Belongs to the ABC transporter superfamily. | 0.917 |
Rru_A0981 | Rru_A3169 | Rru_A0981 | Rru_A3169 | Binding-protein-dependent transport systems inner membrane component. | ABC transporter component; Belongs to the ABC transporter superfamily. | 0.899 |
Rru_A1919 | Rru_A3169 | Rru_A1919 | Rru_A3169 | Binding-protein-dependent transport systems inner membrane component. | ABC transporter component; Belongs to the ABC transporter superfamily. | 0.926 |
Rru_A2012 | Rru_A3167 | Rru_A2012 | Rru_A3167 | Binding-protein-dependent transport systems inner membrane component. | Binding-protein-dependent transport systems inner membrane component. | 0.500 |
Rru_A2012 | Rru_A3169 | Rru_A2012 | Rru_A3169 | Binding-protein-dependent transport systems inner membrane component. | ABC transporter component; Belongs to the ABC transporter superfamily. | 0.958 |
Rru_A2358 | Rru_A3169 | Rru_A2358 | Rru_A3169 | Binding-protein-dependent transport systems inner membrane component. | ABC transporter component; Belongs to the ABC transporter superfamily. | 0.905 |
Rru_A3166 | Rru_A3167 | Rru_A3166 | Rru_A3167 | Extracellular solute-binding protein, family 5. | Binding-protein-dependent transport systems inner membrane component. | 0.975 |
Rru_A3166 | Rru_A3168 | Rru_A3166 | Rru_A3168 | Extracellular solute-binding protein, family 5. | Binding-protein-dependent transport systems inner membrane component. | 0.961 |
Rru_A3166 | Rru_A3169 | Rru_A3166 | Rru_A3169 | Extracellular solute-binding protein, family 5. | ABC transporter component; Belongs to the ABC transporter superfamily. | 0.956 |
Rru_A3167 | Rru_A2012 | Rru_A3167 | Rru_A2012 | Binding-protein-dependent transport systems inner membrane component. | Binding-protein-dependent transport systems inner membrane component. | 0.500 |
Rru_A3167 | Rru_A3166 | Rru_A3167 | Rru_A3166 | Binding-protein-dependent transport systems inner membrane component. | Extracellular solute-binding protein, family 5. | 0.975 |
Rru_A3167 | Rru_A3168 | Rru_A3167 | Rru_A3168 | Binding-protein-dependent transport systems inner membrane component. | Binding-protein-dependent transport systems inner membrane component. | 0.986 |
Rru_A3167 | Rru_A3169 | Rru_A3167 | Rru_A3169 | Binding-protein-dependent transport systems inner membrane component. | ABC transporter component; Belongs to the ABC transporter superfamily. | 0.974 |
Rru_A3168 | Rru_A3166 | Rru_A3168 | Rru_A3166 | Binding-protein-dependent transport systems inner membrane component. | Extracellular solute-binding protein, family 5. | 0.961 |
Rru_A3168 | Rru_A3167 | Rru_A3168 | Rru_A3167 | Binding-protein-dependent transport systems inner membrane component. | Binding-protein-dependent transport systems inner membrane component. | 0.986 |
Rru_A3168 | Rru_A3169 | Rru_A3168 | Rru_A3169 | Binding-protein-dependent transport systems inner membrane component. | ABC transporter component; Belongs to the ABC transporter superfamily. | 0.987 |
Rru_A3169 | NikC | Rru_A3169 | Rru_A2275 | ABC transporter component; Belongs to the ABC transporter superfamily. | Binding-protein-dependent transport systems inner membrane component. | 0.881 |
Rru_A3169 | Rru_A0590 | Rru_A3169 | Rru_A0590 | ABC transporter component; Belongs to the ABC transporter superfamily. | Binding-protein-dependent transport systems inner membrane component. | 0.899 |
page 1 of 2