STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rru_A3280Conserved hypothetical protein. (166 aa)    
Predicted Functional Partners:
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.841
Rru_A3282
Conserved hypothetical protein.
 
     0.664
Rru_A3279
Protein of unknown function DUF526.
 
     0.661
secE
Protein translocase subunit secE/sec61 gamma; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.644
Rru_A3086
Conserved hypothetical protein.
  
     0.624
Rru_A2069
Hypothetical protein.
  
     0.598
Rru_A3556
Conserved hypothetical protein.
  
     0.583
Rru_A1048
Protein of unknown function DUF465.
  
     0.577
Rru_A2770
Uncharacterized conserved protein UCP032146; Belongs to the UPF0262 family.
  
     0.567
Rru_A3733
HNH endonuclease.
  
    0.546
Your Current Organism:
Rhodospirillum rubrum
NCBI taxonomy Id: 269796
Other names: R. rubrum ATCC 11170, Rhodospirillum rubrum ATCC 11170, Rhodospirillum rubrum S1, Rhodospirillum rubrum str. ATCC 11170, Rhodospirillum rubrum strain ATCC 11170
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.