STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rru_A3283Phasin. (158 aa)    
Predicted Functional Partners:
Rru_A0273
3-oxoacyl-[acyl-carrier-protein] reductase.
  
   
 0.706
Rru_A0275
Alpha/beta hydrolase fold.
 
  
 0.691
Rru_A0276
Polyhydroxyalkanoate synthesis repressor PhaR.
 
   
 0.682
Rru_A2413
Poly(R)-hydroxyalkanoic acid synthase, class I.
 
  
 0.669
Rru_A1585
Putative depolymerase.
      
 0.659
Rru_A2968
Hypothetical protein.
  
     0.636
Rru_A3282
Conserved hypothetical protein.
 
     0.625
Rru_A0012
Hypothetical protein.
 
     0.618
Rru_A1595
Outer membrane chaperone Skp (OmpH).
  
     0.594
Rru_A0013
Conserved hypothetical protein.
  
     0.588
Your Current Organism:
Rhodospirillum rubrum
NCBI taxonomy Id: 269796
Other names: R. rubrum ATCC 11170, Rhodospirillum rubrum ATCC 11170, Rhodospirillum rubrum S1, Rhodospirillum rubrum str. ATCC 11170, Rhodospirillum rubrum strain ATCC 11170
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