STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rru_A3325Integral membrane protein linked to a cation pump-like. (169 aa)    
Predicted Functional Partners:
Rru_A3330
Cytochrome c oxidase cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 
 0.979
Rru_A3332
Cytochrome c oxidase cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.972
Rru_A3326
4Fe-4S ferredoxin, iron-sulfur binding.
 
  
 0.971
Rru_A3331
Cytochrome C oxidase, mono-heme subunit/FixO.
 
 
 0.960
Rru_A3324
Copper-translocating P-type ATPase.
 
  
 0.944
Rru_A3323
Cytochrome oxidase maturation protein cbb3-type.
 
  
 0.901
Rru_A2645
Conserved hypothetical protein.
  
 
 0.851
Rru_A3184
Hypothetical protein.
 
 
 0.830
cycA
Cytochrome c, class I; Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is found in some non-photosynthetic bacteria.
  
   0.747
Rru_A0362
Cytochrome c1.
    
 
 0.681
Your Current Organism:
Rhodospirillum rubrum
NCBI taxonomy Id: 269796
Other names: R. rubrum ATCC 11170, Rhodospirillum rubrum ATCC 11170, Rhodospirillum rubrum S1, Rhodospirillum rubrum str. ATCC 11170, Rhodospirillum rubrum strain ATCC 11170
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