STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rru_A3704Periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family. (316 aa)    
Predicted Functional Partners:
Rru_A3703
ABC-3 transporter component.
  
 0.989
Rru_A3702
ABC transporter component.
 
  
 0.966
Rru_A2892
ABC-3 transporter component.
  
 0.962
Rru_A2893
ABC-3 transporter component.
  
 0.927
Rru_A2388
ABC-3 transporter component.
  
 0.903
Rru_A2894
ABC transporter component.
 
  
 0.887
Rru_A2389
ABC transporter component.
 
  
 0.852
metN
ABC transporter component; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
     
 0.789
Rru_A0563
Twin-arginine translocation pathway signal.
      
 0.670
Rru_A2419
ABC transporter component; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
     
 0.623
Your Current Organism:
Rhodospirillum rubrum
NCBI taxonomy Id: 269796
Other names: R. rubrum ATCC 11170, Rhodospirillum rubrum ATCC 11170, Rhodospirillum rubrum S1, Rhodospirillum rubrum str. ATCC 11170, Rhodospirillum rubrum strain ATCC 11170
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