STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ69015.1UDP-N-acetylmuramate dehydrogenase. (318 aa)    
Predicted Functional Partners:
AAZ69014.1
UDP-N-acetylglucosamine 1-carboxyvinyltransferase.
 
  
 0.991
fni
Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
 0.816
AAZ72284.1
F420H2 dehydrogenase subunit B; Belongs to the complex I 20 kDa subunit family.
   
 
 0.638
AAZ72283.1
F420H2 dehydrogenase subunit C.
   
 
 0.633
fpoH
F420H2 dehydrogenase subunit H; Component of the F(420)H(2) dehydrogenase (FPO complex) which is part of the energy-conserving F(420)H(2):heterodisulfide oxidoreductase system. The membrane-bound electron transfer system of the complex plays an important role in the metabolism of methylotrophic methanogens when the organisms grow on methanol or methylamines. Catalyzes the oxidation of methanophenazine to dihydromethanophenazine. It shuttles electrons from F(420)H(2), via FAD and iron-sulfur (Fe-S) centers, to methanophenazine (an electron carrier in the membrane). It couples the redox [...]
   
 
 0.600
AAZ72274.1
F420H2 dehydrogenase subunit N.
   
 
 0.599
AAZ72285.1
F420H2 dehydrogenase subunit A.
   
 
 0.599
AAZ72282.1
F420H2 dehydrogenase subunit D.
   
 
 0.572
AAZ69013.1
UDP-glucose 4-epimerase.
  
  
 0.526
AAZ69531.1
acetyl-CoA acyltransferase.
  
 0.502
Your Current Organism:
Methanosarcina barkeri Fusaro
NCBI taxonomy Id: 269797
Other names: M. barkeri str. Fusaro, Methanosarcina barkeri DSM 804, Methanosarcina barkeri str. Fusaro, Methanosarcina barkeri strain Fusaro
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