STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ69486.1Conserved hypothetical protein. (729 aa)    
Predicted Functional Partners:
AAZ69483.1
Conserved hypothetical protein.
 
    0.931
AAZ71407.1
Conserved hypothetical protein.
  
    0.792
AAZ69479.1
Conserved hypothetical protein.
 
     0.786
AAZ69487.1
dolichol-P-glucose synthetase.
 
  
 0.771
AAZ69763.1
Conserved hypothetical protein.
   
    0.615
AAZ71625.1
Conserved hypothetical protein.
   
    0.615
cofC
Phospholactate guanylyltransferase; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor; Belongs to the CofC family.
  
     0.554
AAZ70848.1
Conserved hypothetical protein.
  
     0.533
AAZ71406.1
Conserved hypothetical protein.
  
     0.529
AAZ70172.1
Translin family protein.
  
     0.515
Your Current Organism:
Methanosarcina barkeri Fusaro
NCBI taxonomy Id: 269797
Other names: M. barkeri str. Fusaro, Methanosarcina barkeri DSM 804, Methanosarcina barkeri str. Fusaro, Methanosarcina barkeri strain Fusaro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.