STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ilvEBranched chain amino acid aminotransferase apoenzyme; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (292 aa)    
Predicted Functional Partners:
ilvD
Dihydroxyacid dehydratase; Belongs to the IlvD/Edd family.
  
 0.991
AAZ69914.1
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 
 0.968
AAZ70838.1
Homoserine dehydrogenase.
 
 
 0.946
AAZ71102.1
Ketoisovalerate ferredoxin oxidoreductase, alpha subunit.
  
 
 0.919
AAZ71103.1
Ketoisovalerate ferredoxin oxidoreductase, gamma subunit.
    
 0.912
AAZ71101.1
Ketoisovalerate ferredoxin oxidoreductase, delta subunit.
    
  0.902
AAZ71209.1
Dihydroxy-acid dehydratase.
  
 
 0.896
AAZ72146.1
Sodium/proton antiporter, CPA1 family; TC 2.A.36.
     
 0.854
AAZ69203.1
Acetolactate synthase, small subunit.
  
 
 0.847
AAZ69202.1
Acetolactate synthase, large subunit.
  
 
 0.845
Your Current Organism:
Methanosarcina barkeri Fusaro
NCBI taxonomy Id: 269797
Other names: M. barkeri str. Fusaro, Methanosarcina barkeri DSM 804, Methanosarcina barkeri str. Fusaro, Methanosarcina barkeri strain Fusaro
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