STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ69710.1Transporter. (660 aa)    
Predicted Functional Partners:
AAZ69709.1
Type II secretion system protein.
 
  
 0.922
AAZ70446.1
Conserved hypothetical protein.
 
   
 0.883
AAZ70350.1
Conserved hypothetical protein.
 
   
 0.790
AAZ70901.1
Flagella related protein FlaI.
 
  
 0.770
AAZ71246.1
Conserved hypothetical protein.
  
    0.766
AAZ72573.1
Conserved hypothetical protein.
 
  
 0.763
AAZ70689.1
Conserved hypothetical protein.
  
    0.761
AAZ69226.1
Transmembrane oligosaccharyl transferase.
 
   
 0.721
AAZ69227.1
Transmembrane oligosaccharyl transferase.
 
   
 0.719
AAZ70295.1
Transcriptional regulator, ArsR family.
 
     0.714
Your Current Organism:
Methanosarcina barkeri Fusaro
NCBI taxonomy Id: 269797
Other names: M. barkeri str. Fusaro, Methanosarcina barkeri DSM 804, Methanosarcina barkeri str. Fusaro, Methanosarcina barkeri strain Fusaro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.