STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ69898.1Conserved hypothetical protein. (517 aa)    
Predicted Functional Partners:
eif5a
Translation initiation factor 5A precursor (eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.
  
 0.913
AAZ72515.1
HesB protein.
   
 
 0.740
AAZ71040.1
Conserved hypothetical protein.
  
     0.679
AAZ71340.1
Phosphorylase.
  
     0.676
AAZ72507.1
TPR-domain containing protein.
 
 
 0.632
AAZ69004.1
Conserved hypothetical protein.
 
 
 0.622
AAZ69158.1
Conserved hypothetical protein.
 
 
 0.616
AAZ69897.1
Prephenate dehydrogenase.
 
     0.615
AAZ72263.1
Conserved hypothetical protein.
 
  
 0.612
AAZ69264.1
TPR-domain containing protein.
 
 
 0.600
Your Current Organism:
Methanosarcina barkeri Fusaro
NCBI taxonomy Id: 269797
Other names: M. barkeri str. Fusaro, Methanosarcina barkeri DSM 804, Methanosarcina barkeri str. Fusaro, Methanosarcina barkeri strain Fusaro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.