STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ70049.1Conserved hypothetical protein. (205 aa)    
Predicted Functional Partners:
AAZ70048.1
Conserved hypothetical protein.
       0.817
AAZ69132.1
Ech hydrogenase subunit F.
  
 
 0.730
AAZ72280.1
F420H2 dehydrogenase subunit I.
  
 
 0.730
AAZ70752.1
Ferredoxin.
  
 
 0.705
AAZ71101.1
Ketoisovalerate ferredoxin oxidoreductase, delta subunit.
  
 
 0.705
AAZ70508.1
Formate dehydrogenase, alpha subunit (F420).
  
  
 0.564
AAZ72528.1
Conserved hypothetical protein.
 
  
 0.537
AAZ70050.1
Conserved hypothetical protein.
     
 0.453
Your Current Organism:
Methanosarcina barkeri Fusaro
NCBI taxonomy Id: 269797
Other names: M. barkeri str. Fusaro, Methanosarcina barkeri DSM 804, Methanosarcina barkeri str. Fusaro, Methanosarcina barkeri strain Fusaro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.