STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ70880.1Peptidylprolyl isomerase. (169 aa)    
Predicted Functional Partners:
rps2
SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.
  
 
 0.800
AAZ70879.1
Peptidyl-prolyl cis-trans isomerase.
 
    
0.783
rps3
SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
  
 
 0.760
AAZ70617.1
Conserved hypothetical protein.
    
 
 0.711
AAZ70792.1
Hydrogenase expression/formation protein.
    
 
 0.711
AAZ71191.1
Conserved hypothetical protein.
    
 
 0.711
AAZ69133.1
Ech hydrogenase subunit E.
    
 
 0.700
AAZ70881.1
Conserved hypothetical protein.
       0.536
AAZ70878.1
Peptidylprolyl isomerase.
 
    
0.523
rps3ae
SSU ribosomal protein S3AE; Belongs to the eukaryotic ribosomal protein eS1 family.
   
    0.495
Your Current Organism:
Methanosarcina barkeri Fusaro
NCBI taxonomy Id: 269797
Other names: M. barkeri str. Fusaro, Methanosarcina barkeri DSM 804, Methanosarcina barkeri str. Fusaro, Methanosarcina barkeri strain Fusaro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.