STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ70900.1Flagella related protein FlaJ. (517 aa)    
Predicted Functional Partners:
AAZ70901.1
Flagella related protein FlaI.
 
  
 0.977
AAZ70902.1
Flagella related protein FlaH.
 
  
 0.974
AAZ69709.1
Type II secretion system protein.
 
  
 0.818
AAZ70903.1
Conserved hypothetical protein.
  
  
 0.816
AAZ70906.1
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
  
 0.778
AAZ70904.1
Conserved hypothetical protein.
  
  
 0.769
AAZ70446.1
Conserved hypothetical protein.
 
   
 0.681
AAZ70350.1
Conserved hypothetical protein.
  
     0.606
AAZ69957.1
Chemotaxis response regulator.
 
  
 0.545
AAZ69955.1
Chemotaxis sensor histidine kinase.
  
  
 0.537
Your Current Organism:
Methanosarcina barkeri Fusaro
NCBI taxonomy Id: 269797
Other names: M. barkeri str. Fusaro, Methanosarcina barkeri DSM 804, Methanosarcina barkeri str. Fusaro, Methanosarcina barkeri strain Fusaro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.