Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAZ70915.1Oligopeptide ABC transporter, ATP-binding protein. (312 aa)    
Predicted Functional Partners:
AAZ72438.1
Dipeptide ABC transporter, permease.
 0.894
AAZ70302.1
Dipeptide ABC transporter, ATP-binding protein.
 
    
0.893
AAZ70911.1
Oligopeptide ABC transporter, permease protein.
 0.889
AAZ72537.1
Oligopeptide ABC transporter, permease.
 0.883
AAZ70914.1
Oligopeptide ABC transporter, ATP-binding protein.
 
0.879
AAZ70559.1
Oligopeptide ABC transporter, permease protein.
 0.869
AAZ70912.1
Oligopeptide ABC transporter, permease protein.
 
 0.862
AAZ69622.1
Oligopeptide ABC transporter, permease protein.
 0.855
AAZ70245.1
Oligopeptide ABC transporter, permease protein.
 0.849
AAZ70964.1
ABC transporter, permease protein.
 0.831
Your Current Organism:
Methanosarcina barkeri Fusaro
NCBI taxonomy Id: 269797
Other names: M. barkeri str. Fusaro, Methanosarcina barkeri DSM 804, Methanosarcina barkeri str. Fusaro, Methanosarcina barkeri strain Fusaro
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