Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AAZ71068.1Polysaccharide biosynthesis protein. (482 aa)    
Predicted Functional Partners:
AAZ71069.1
UDP-N-acetylglucosamine 2-epimerase.
  
  
 0.759
AAZ71070.1
Glycosyltransferase.
 
  
 0.654
AAZ70087.1
UDP-glucose 6-dehydrogenase.
 
  
 0.595
AAZ69215.1
dTDP-glucose 4,6-dehydratase.
  
  
 0.591
AAZ70088.1
UDP-glucose 6-dehydrogenase.
  
  
 0.533
AAZ69214.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.532
AAZ70827.1
dTDP-4-dehydrorhamnose 3,5-epimerase.
  
  
 0.524
AAZ69019.1
LPS glycosyltransferase.
 
  
 0.514
AAZ69040.1
Glycosyl transferase.
 
  
 0.480
AAZ70107.1
NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.466
Your Current Organism:
Methanosarcina barkeri Fusaro
NCBI taxonomy Id: 269797
Other names: M. barkeri str. Fusaro, Methanosarcina barkeri DSM 804, Methanosarcina barkeri str. Fusaro, Methanosarcina barkeri strain Fusaro
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