STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ71068.1Polysaccharide biosynthesis protein. (482 aa)    
Predicted Functional Partners:
AAZ71069.1
UDP-N-acetylglucosamine 2-epimerase.
  
  
 0.763
AAZ71070.1
Glycosyltransferase.
 
  
 0.669
AAZ70087.1
UDP-glucose 6-dehydrogenase.
 
  
 0.626
AAZ69215.1
dTDP-glucose 4,6-dehydratase.
  
  
 0.606
AAZ69214.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.575
AAZ70088.1
UDP-glucose 6-dehydrogenase.
  
  
 0.568
AAZ70827.1
dTDP-4-dehydrorhamnose 3,5-epimerase.
  
  
 0.567
AAZ69019.1
LPS glycosyltransferase.
 
  
 0.537
AAZ70105.1
Aspartate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.510
AAZ70107.1
NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.504
Your Current Organism:
Methanosarcina barkeri Fusaro
NCBI taxonomy Id: 269797
Other names: M. barkeri str. Fusaro, Methanosarcina barkeri DSM 804, Methanosarcina barkeri str. Fusaro, Methanosarcina barkeri strain Fusaro
Server load: low (12%) [HD]