STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ71084.1Hypothetical protein. (339 aa)    
Predicted Functional Partners:
AAZ69295.1
Acetyltransferase related protein.
 
 
 
 0.632
AAZ71471.1
Hypothetical protein.
 
 
 
 0.631
AAZ69283.1
N-acetyltransferase.
 
 
 
 0.626
AAZ72271.1
Ribosomal-protein-alanine acetyltransferase.
   
 
 0.572
AAZ70921.1
Conserved hypothetical protein.
  
     0.514
AAZ70169.1
Possible beta-lactamase class C and other pencillin-binding proteins.
 
     0.469
AAZ72381.1
Hypothetical protein.
 
  
 0.457
AAZ70496.1
Antibiotic resistance protein.
 
     0.446
AAZ70499.1
Fe-only nitrogenase FeFe protein subunit AnfG.
  
     0.428
AAZ71202.1
V-nitrogenase VFe protein subunit VnfG.
  
     0.424
Your Current Organism:
Methanosarcina barkeri Fusaro
NCBI taxonomy Id: 269797
Other names: M. barkeri str. Fusaro, Methanosarcina barkeri DSM 804, Methanosarcina barkeri str. Fusaro, Methanosarcina barkeri strain Fusaro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.