STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ71100.1AMP-binding protein. (559 aa)    
Predicted Functional Partners:
AAZ69693.1
Citrate synthase.
  
 0.996
AAZ69531.1
acetyl-CoA acyltransferase.
  
 
 0.981
AAZ71099.1
Transcriptional regulator.
 
 0.969
AAZ70762.1
Phosphotransacetylase.
     
 0.960
AAZ69914.1
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.933
AAZ71120.1
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.933
AAZ71193.1
Homocitrate synthase.
  
 
 0.933
AAZ71194.1
Homocitrate synthase.
  
 
 0.933
porA
Pyruvate ferredoxin oxidoreductase, alpha subunit.
  
 
 0.931
porD
Pyruvate ferredoxin oxidoreductase, delta subunit.
  
 
 0.930
Your Current Organism:
Methanosarcina barkeri Fusaro
NCBI taxonomy Id: 269797
Other names: M. barkeri str. Fusaro, Methanosarcina barkeri DSM 804, Methanosarcina barkeri str. Fusaro, Methanosarcina barkeri strain Fusaro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.