STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ71305.1Conserved hypothetical ABC transporter ATP-binding protein MJ0796. (228 aa)    
Predicted Functional Partners:
AAZ71306.1
Conserved hypothetical protein.
 
 0.994
AAZ69661.1
ABC transporter, permease protein.
 
 0.987
AAZ71904.1
ABC transporter, permease protein.
 
 0.986
AAZ69724.1
Putative ABC transport system permease protein.
 
 0.983
AAZ71688.1
Putative ABC transport system permease protein.
 
 0.977
AAZ72213.1
ABC transporter, permease protein.
 
 0.949
AAZ69767.1
Putative ABC transporter permease protein.
 
 0.916
AAZ71304.1
Hypothetical protein.
  
    0.811
AAZ71303.1
Conserved hypothetical protein.
       0.767
AAZ71560.1
ABC transporter, permease protein.
  
 
 0.741
Your Current Organism:
Methanosarcina barkeri Fusaro
NCBI taxonomy Id: 269797
Other names: M. barkeri str. Fusaro, Methanosarcina barkeri DSM 804, Methanosarcina barkeri str. Fusaro, Methanosarcina barkeri strain Fusaro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.