STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ71380.1Nitroreductase. (202 aa)    
Predicted Functional Partners:
AAZ69251.1
Long-chain fatty-acid-CoA ligase.
   
 
 0.703
AAZ71721.1
Long-chain fatty-acid-CoA ligase.
   
 
 0.703
AAZ69798.1
Conserved hypothetical protein.
  
  
 0.557
AAZ70154.1
Glyoxalase.
  
  
 0.482
AAZ69581.1
Putative ABC-2 type transport system permease protein.
  
  
 0.404
AAZ69663.1
ABC transporter, permease protein.
  
  
 0.404
AAZ70707.1
Multidrug ABC transporter, permease protein.
  
  
 0.404
AAZ71398.1
Conserved hypothetical protein.
  
  
 0.404
AAZ71428.1
ABC transporter, permease protein.
  
  
 0.404
AAZ72126.1
Multidrug ABC transporter, permease protein.
  
  
 0.404
Your Current Organism:
Methanosarcina barkeri Fusaro
NCBI taxonomy Id: 269797
Other names: M. barkeri str. Fusaro, Methanosarcina barkeri DSM 804, Methanosarcina barkeri str. Fusaro, Methanosarcina barkeri strain Fusaro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.