STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ71527.1Sulfite reductase, beta subunit. (285 aa)    
Predicted Functional Partners:
AAZ69932.1
NADH oxidase.
   
 0.928
AAZ69641.1
Coenzyme F420 hydrogenase beta subunit.
    
 0.650
AAZ70732.1
uroporphyrinogen-III C-methyltransferase; Involved in the archaeal biosynthesis of heme. Catalyzes the methylation of carbons 2 and 7 of uroporphyrinogen-III (UROGEN) to yield precorrin-2. It does not catalyze the overmethylation of precorrin-2 to trimethylpyrrocorphin.
 
   
 0.630
AAZ70508.1
Formate dehydrogenase, alpha subunit (F420).
 
   
 0.480
AAZ69239.1
F420H2 dehydrogenase subunit F.
    
 0.468
AAZ70418.1
Precorrin-2 oxidase / ferrochelatase; Involved in the archaeal biosynthesis of heme. Catalyzes the oxiation of precorrin-2 into sirohydroclorin. Belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.
 
     0.457
AAZ70681.1
Conserved hypothetical protein.
     
 0.454
AAZ69133.1
Ech hydrogenase subunit E.
     
 0.428
AAZ69136.1
Ech hydrogenase subunit B.
     
 0.419
AAZ71525.1
Hypothetical protein.
       0.412
Your Current Organism:
Methanosarcina barkeri Fusaro
NCBI taxonomy Id: 269797
Other names: M. barkeri str. Fusaro, Methanosarcina barkeri DSM 804, Methanosarcina barkeri str. Fusaro, Methanosarcina barkeri strain Fusaro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.