STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ71894.1Conserved hypothetical protein. (146 aa)    
Predicted Functional Partners:
AAZ72266.1
Cell surface protein.
  
     0.517
AAZ69909.1
Conserved hypothetical protein.
  
     0.498
AAZ71072.1
Cell surface protein.
  
     0.490
AAZ70636.1
Conserved hypothetical protein.
  
     0.457
AAZ72107.1
Cell surface lipoprotein.
  
     0.422
AAZ70393.1
Cell surface protein.
  
     0.419
AAZ69520.1
Conserved hypothetical protein.
  
     0.415
AAZ71133.1
Hypothetical protein.
  
     0.413
AAZ70626.1
Cell surface glycoprotein.
  
     0.408
AAZ69729.1
Conserved hypothetical protein.
  
     0.406
Your Current Organism:
Methanosarcina barkeri Fusaro
NCBI taxonomy Id: 269797
Other names: M. barkeri str. Fusaro, Methanosarcina barkeri DSM 804, Methanosarcina barkeri str. Fusaro, Methanosarcina barkeri strain Fusaro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.