STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ72040.1Hypothetical protein. (631 aa)    
Predicted Functional Partners:
AAZ70737.1
Outer membrane protein.
  
     0.624
AAZ72039.1
Hypothetical protein.
 
    
0.591
AAZ72038.1
Conserved hypothetical protein.
 
     0.552
AAZ72595.1
Hypothetical protein.
  
     0.548
AAZ70093.1
Hypothetical protein.
  
     0.526
AAZ70094.1
Hypothetical protein.
  
     0.526
AAZ71054.1
Hypothetical protein.
 
     0.522
AAZ70636.1
Conserved hypothetical protein.
  
     0.512
AAZ71853.1
Conserved hypothetical protein.
  
     0.512
AAZ70714.1
Conserved hypothetical protein.
 
     0.491
Your Current Organism:
Methanosarcina barkeri Fusaro
NCBI taxonomy Id: 269797
Other names: M. barkeri str. Fusaro, Methanosarcina barkeri DSM 804, Methanosarcina barkeri str. Fusaro, Methanosarcina barkeri strain Fusaro
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.