STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ72318.1Conserved hypothetical protein. (389 aa)    
Predicted Functional Partners:
AAZ72317.1
Putative ABC transporter permease protein.
 
  
 
0.950
lolD-2
ABC transporter, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
 
  
  0.944
lolD
Lipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
 
  
  0.910
AAZ69660.1
ABC transporter, ATP-binding protein.
 
     0.536
AAZ71305.1
Conserved hypothetical ABC transporter ATP-binding protein MJ0796.
 
     0.511
AAZ72215.1
ABC transporter, ATP-binding protein.
 
     0.510
AAZ71906.1
ABC transporter, ATP-binding protein.
 
     0.509
AAZ72424.1
ABC transporter, ATP-binding protein.
 
     0.497
AAZ69768.1
ABC transporter, ATP-binding protein.
 
     0.475
AAZ71559.1
ABC transporter, ATP-binding protein.
 
     0.457
Your Current Organism:
Methanosarcina barkeri Fusaro
NCBI taxonomy Id: 269797
Other names: M. barkeri str. Fusaro, Methanosarcina barkeri DSM 804, Methanosarcina barkeri str. Fusaro, Methanosarcina barkeri strain Fusaro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.