STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ72472.1Dimethylamine corrinoid protein. (214 aa)    
Predicted Functional Partners:
AAZ69817.1
Methylamine-specific methylcobalamin:coenzyme M methyltransferase.
 
 0.940
mtmB1
Monomethylamine:corrinoid methyltransferase; Catalyzes the transfer of the methyl group from monomethylamine to the corrinoid cofactor of MtmC.
 
  
 0.921
AAZ71071.1
Corrinoid protein.
 
  
 
0.913
AAZ69818.1
Monomethylamine corrinoid protein.
 
  
 
0.908
AAZ69821.1
Monomethylamine corrinoid protein.
 
  
 
0.908
AAZ72498.1
Monomethylamine corrinoid protein.
 
  
 
0.908
AAZ70457.1
Dimethylamine corrinoid protein.
 
  
 
0.906
AAZ70456.1
Dimethylamine corrinoid protein.
  
  
 
0.901
AAZ70630.1
Methylcobalamin:coenzyme M methyltransferase.
 
 0.790
AAZ72503.1
Methanol-specific methylcobalamin: coenzyme M methyltransferase.
 
 0.790
Your Current Organism:
Methanosarcina barkeri Fusaro
NCBI taxonomy Id: 269797
Other names: M. barkeri str. Fusaro, Methanosarcina barkeri DSM 804, Methanosarcina barkeri str. Fusaro, Methanosarcina barkeri strain Fusaro
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