STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAZ72515.1HesB protein. (106 aa)    
Predicted Functional Partners:
dnaK
Heat shock protein 70; Acts as a chaperone.
  
 
 0.821
AAZ70046.1
Iron-regulated ABC transporter ATPase subunit SufC.
  
 
 0.788
AAZ72331.1
ABC transporter, ATP-binding protein.
  
 
 0.788
AAZ70047.1
Conserved hypothetical protein.
  
 
 0.782
AAZ72332.1
ABC transporter, ATP-binding protein.
  
 
 0.782
AAZ70678.1
NifU protein.
  
  
 0.751
AAZ71345.1
NifU protein.
  
  
 0.751
AAZ72086.1
Nitrogen fixation protein.
  
  
 0.751
AAZ69898.1
Conserved hypothetical protein.
   
 
 0.740
AAZ70758.1
Phycocyanin alpha phycocyanobilin lyase.
   
 
 0.740
Your Current Organism:
Methanosarcina barkeri Fusaro
NCBI taxonomy Id: 269797
Other names: M. barkeri str. Fusaro, Methanosarcina barkeri DSM 804, Methanosarcina barkeri str. Fusaro, Methanosarcina barkeri strain Fusaro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.