STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHU_0162Cation efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (389 aa)    
Predicted Functional Partners:
cusA
Possible copper transport protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.995
CHU_1512
Cation efflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.982
czcA
Cation eflux protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
   0.845
cusA-2
Heavy metal efflux pump protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
   0.828
CHU_1505
Conserved hypothetical protein.
  
     0.625
czcC
Outer membrane protein; cation efflux protein.
 
   0.580
CHU_0160
Hypothetical protein.
       0.563
CHU_1503
Conserved hypothetical protein.
  
   0.547
acrB
AcrB/AcrD family multidrug resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
   0.505
acrB-2
Acriflavine resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
   0.504
Your Current Organism:
Cytophaga hutchinsonii
NCBI taxonomy Id: 269798
Other names: C. hutchinsonii ATCC 33406, Cytophaga hutchinsonii ATCC 33406, Cytophaga hutchinsonii str. ATCC 33406, Cytophaga hutchinsonii strain ATCC 33406
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.