STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHU_0311Gamma-glutamyl carboxylase-like protein. (448 aa)    
Predicted Functional Partners:
fecA
iron(III) dicitrate transport protein, outer membrane receptor.
 
     0.949
CHU_0310
Conserved hypothetical protein.
 
     0.935
CHU_0309
Hypothetical protein.
 
     0.884
CHU_0668
Conserved hypothetical protein.
 
     0.787
pfkB
6-phosphofructokinase II; Belongs to the carbohydrate kinase PfkB family.
   
    0.722
CHU_3710
Hypothetical protein.
  
     0.447
CHU_3705
Conserved hypothetical protein.
  
     0.435
Your Current Organism:
Cytophaga hutchinsonii
NCBI taxonomy Id: 269798
Other names: C. hutchinsonii ATCC 33406, Cytophaga hutchinsonii ATCC 33406, Cytophaga hutchinsonii str. ATCC 33406, Cytophaga hutchinsonii strain ATCC 33406
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.