Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CHU_0606 | CHU_0607 | CHU_0606 | CHU_0607 | Conserved hypothetical protein. | Hypothetical protein; possible glycosyltransferase. | 0.776 |
CHU_0606 | CHU_0608 | CHU_0606 | CHU_0608 | Conserved hypothetical protein. | Hypothetical protein. | 0.578 |
CHU_0606 | lgtF | CHU_0606 | CHU_0605 | Conserved hypothetical protein. | B-glycosyltransferase, glycosyltransferase family 2 protein. | 0.750 |
CHU_0606 | wcaL | CHU_0606 | CHU_0604 | Conserved hypothetical protein. | A-glycosyltransferase-related protein, glycosyltransferase family 4 protein. | 0.749 |
CHU_0607 | CHU_0606 | CHU_0607 | CHU_0606 | Hypothetical protein; possible glycosyltransferase. | Conserved hypothetical protein. | 0.776 |
CHU_0607 | CHU_0608 | CHU_0607 | CHU_0608 | Hypothetical protein; possible glycosyltransferase. | Hypothetical protein. | 0.578 |
CHU_0607 | lgtF | CHU_0607 | CHU_0605 | Hypothetical protein; possible glycosyltransferase. | B-glycosyltransferase, glycosyltransferase family 2 protein. | 0.779 |
CHU_0607 | wcaL | CHU_0607 | CHU_0604 | Hypothetical protein; possible glycosyltransferase. | A-glycosyltransferase-related protein, glycosyltransferase family 4 protein. | 0.761 |
CHU_0608 | CHU_0606 | CHU_0608 | CHU_0606 | Hypothetical protein. | Conserved hypothetical protein. | 0.578 |
CHU_0608 | CHU_0607 | CHU_0608 | CHU_0607 | Hypothetical protein. | Hypothetical protein; possible glycosyltransferase. | 0.578 |
CHU_0608 | lgtF | CHU_0608 | CHU_0605 | Hypothetical protein. | B-glycosyltransferase, glycosyltransferase family 2 protein. | 0.559 |
CHU_0608 | wcaL | CHU_0608 | CHU_0604 | Hypothetical protein. | A-glycosyltransferase-related protein, glycosyltransferase family 4 protein. | 0.559 |
lgtF | CHU_0606 | CHU_0605 | CHU_0606 | B-glycosyltransferase, glycosyltransferase family 2 protein. | Conserved hypothetical protein. | 0.750 |
lgtF | CHU_0607 | CHU_0605 | CHU_0607 | B-glycosyltransferase, glycosyltransferase family 2 protein. | Hypothetical protein; possible glycosyltransferase. | 0.779 |
lgtF | CHU_0608 | CHU_0605 | CHU_0608 | B-glycosyltransferase, glycosyltransferase family 2 protein. | Hypothetical protein. | 0.559 |
lgtF | lpxK | CHU_0605 | CHU_1804 | B-glycosyltransferase, glycosyltransferase family 2 protein. | lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.614 |
lgtF | wcaL | CHU_0605 | CHU_0604 | B-glycosyltransferase, glycosyltransferase family 2 protein. | A-glycosyltransferase-related protein, glycosyltransferase family 4 protein. | 0.826 |
lpxK | lgtF | CHU_1804 | CHU_0605 | lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | B-glycosyltransferase, glycosyltransferase family 2 protein. | 0.614 |
wcaL | CHU_0606 | CHU_0604 | CHU_0606 | A-glycosyltransferase-related protein, glycosyltransferase family 4 protein. | Conserved hypothetical protein. | 0.749 |
wcaL | CHU_0607 | CHU_0604 | CHU_0607 | A-glycosyltransferase-related protein, glycosyltransferase family 4 protein. | Hypothetical protein; possible glycosyltransferase. | 0.761 |
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