Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CHU_0656 | CHU_0909 | CHU_0656 | CHU_0909 | Aldose 1-epimerase. | Possible haloacid dehalogenase-like hydrolase. | 0.902 |
CHU_0656 | dacB | CHU_0656 | CHU_1364 | Aldose 1-epimerase. | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4). | 0.413 |
CHU_0656 | fimZ | CHU_0656 | CHU_0659 | Aldose 1-epimerase. | Fimbrial Z protein; probable signal transducer. | 0.485 |
CHU_0656 | galK | CHU_0656 | CHU_0657 | Aldose 1-epimerase. | Galactokinase; Belongs to the GHMP kinase family. GalK subfamily. | 0.993 |
CHU_0656 | glk | CHU_0656 | CHU_1875 | Aldose 1-epimerase. | Glucokinase. | 0.909 |
CHU_0656 | glmU | CHU_0656 | CHU_0658 | Aldose 1-epimerase. | UDP-N-acetylglucosamine pyrophosphorylase. | 0.778 |
CHU_0909 | CHU_0656 | CHU_0909 | CHU_0656 | Possible haloacid dehalogenase-like hydrolase. | Aldose 1-epimerase. | 0.902 |
CHU_0909 | glk | CHU_0909 | CHU_1875 | Possible haloacid dehalogenase-like hydrolase. | Glucokinase. | 0.919 |
dacB | CHU_0656 | CHU_1364 | CHU_0656 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4). | Aldose 1-epimerase. | 0.413 |
fimZ | CHU_0656 | CHU_0659 | CHU_0656 | Fimbrial Z protein; probable signal transducer. | Aldose 1-epimerase. | 0.485 |
fimZ | galK | CHU_0659 | CHU_0657 | Fimbrial Z protein; probable signal transducer. | Galactokinase; Belongs to the GHMP kinase family. GalK subfamily. | 0.485 |
fimZ | glmU | CHU_0659 | CHU_0658 | Fimbrial Z protein; probable signal transducer. | UDP-N-acetylglucosamine pyrophosphorylase. | 0.485 |
galK | CHU_0656 | CHU_0657 | CHU_0656 | Galactokinase; Belongs to the GHMP kinase family. GalK subfamily. | Aldose 1-epimerase. | 0.993 |
galK | fimZ | CHU_0657 | CHU_0659 | Galactokinase; Belongs to the GHMP kinase family. GalK subfamily. | Fimbrial Z protein; probable signal transducer. | 0.485 |
galK | glmU | CHU_0657 | CHU_0658 | Galactokinase; Belongs to the GHMP kinase family. GalK subfamily. | UDP-N-acetylglucosamine pyrophosphorylase. | 0.805 |
glk | CHU_0656 | CHU_1875 | CHU_0656 | Glucokinase. | Aldose 1-epimerase. | 0.909 |
glk | CHU_0909 | CHU_1875 | CHU_0909 | Glucokinase. | Possible haloacid dehalogenase-like hydrolase. | 0.919 |
glmU | CHU_0656 | CHU_0658 | CHU_0656 | UDP-N-acetylglucosamine pyrophosphorylase. | Aldose 1-epimerase. | 0.778 |
glmU | fimZ | CHU_0658 | CHU_0659 | UDP-N-acetylglucosamine pyrophosphorylase. | Fimbrial Z protein; probable signal transducer. | 0.485 |
glmU | galK | CHU_0658 | CHU_0657 | UDP-N-acetylglucosamine pyrophosphorylase. | Galactokinase; Belongs to the GHMP kinase family. GalK subfamily. | 0.805 |