STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHU_0705Ferrodoxin. (101 aa)    
Predicted Functional Partners:
nuoE
NADH dehydrogenase subunit E.
 
 
 0.939
napA
Periplasmic nitrate reductase/nitrite reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.935
yjjG
Probable haloacid dehalogenase-like hydrolase.
       0.797
CHU_0703
Delta-1-pyrroline-5-carboxylate dehydrogenase.
     
 0.734
pobR
Transcriptional regulator, AraC family.
       0.732
folE
GTP cyclohydrolase I.
      
 0.583
folE-2
GTP cyclohydrolase I.
      
 0.583
folE-3
GTP cyclohydrolase I.
      
 0.583
nuoM
NADH dehydrogenase subunit M.
  
    0.576
nuoM-2
NADH dehydrogenase subunit M.
  
    0.576
Your Current Organism:
Cytophaga hutchinsonii
NCBI taxonomy Id: 269798
Other names: C. hutchinsonii ATCC 33406, Cytophaga hutchinsonii ATCC 33406, Cytophaga hutchinsonii str. ATCC 33406, Cytophaga hutchinsonii strain ATCC 33406
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.