STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHU_1044B-glycosyltransferase, glycosyltransferase family 2 protein. (652 aa)    
Predicted Functional Partners:
CHU_1927
Bacterial sugar transferase.
  
 0.890
recR
Recombination protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.786
CHU_2177
Membrane protein of EXOQ family/lipid A core - O-antigen ligase.
 
  
 0.758
CHU_0602
Lipid A core--O-antigen ligase.
 
  
 0.754
CHU_0929
A-glycosyltransferase-related protein, glycosyltransferase family 4 protein.
  
    0.724
rfaG
A-glycosyltransferase, glycosyltransferase family 4 protein.
 
    0.720
CHU_2176
Conserved hypothetical protein; possible exporter of O-antigen and teichoic acid.
  
    0.708
CHU_2781
A-glycosyltransferase-related protein, glycosyltransferase family 4 protein.
  
    0.699
CHU_1043
Hypothetical protein.
       0.668
CHU_0930
A-glycosyltransferase-related protein, glycosyltransferase family 4 protein.
  
    0.650
Your Current Organism:
Cytophaga hutchinsonii
NCBI taxonomy Id: 269798
Other names: C. hutchinsonii ATCC 33406, Cytophaga hutchinsonii ATCC 33406, Cytophaga hutchinsonii str. ATCC 33406, Cytophaga hutchinsonii strain ATCC 33406
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.