STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHU_1107CHU large protein; endoglucanase, glycoside hydrolase family 5 protein. (1302 aa)    
Predicted Functional Partners:
cel-5
Candidate retaining b-glycosidase, glycoside hydrolase family 5 protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
 0.975
cel
Non-processive endocellulase.
 
 
 0.970
cel-3
Non-processive endocellulase.
 
 
 0.970
cel-4
Endoglucanase-related protein, glycoside hydrolase family 5 protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
 0.970
CHU_0778
Glycosylhydrolase family 9 protein.
 
 
 0.962
CHU_2235
Endoglucanase-related protein, glycoside hydrolase family 9 protein.
 
 
 0.960
cel-6
Endoglucanase, glycoside hydrolase family 5 protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
0.908
bglX
B-glucosidase, glycoside hydrolase family 3 protein.
 
  
 0.756
bglX-2
Candidate b-glucosidase, Glycoside Hydrolase Family 3 protein.
 
  
 0.754
bglX-4
Candidate b-glucosidase, Glycoside Hydrolase Family 3 protein.
 
  
 0.747
Your Current Organism:
Cytophaga hutchinsonii
NCBI taxonomy Id: 269798
Other names: C. hutchinsonii ATCC 33406, Cytophaga hutchinsonii ATCC 33406, Cytophaga hutchinsonii str. ATCC 33406, Cytophaga hutchinsonii strain ATCC 33406
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.