STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHU_1237Chemotaxis response regulator (methyltransferase). (1618 aa)    
Predicted Functional Partners:
CHU_2080
Sensor histidine kinase/response regulator fusion protein.
 
 
0.991
cheR
MCP methyltransferase, CheR-type.
 
 
0.986
cheB
Protein-glutamate methylesterase (chemotaxis-specific methylesterase).
 
 
0.985
evgS-3
Sensor histidine kinase/response regulator fusion protein.
 
0.983
arcB-11
Multi-sensor hybrid histidine kinase.
  
 
 0.977
CHU_2895
PAS/PAC sensor hybrid histidine kinase.
 
 
0.977
ompA-8
Outer membrane protein, OmpA family.
 
  
 0.954
ompR
Response regulator, with CheY-like and DNB-binding domains.
  
 
 0.941
cheY
Response regulator, CheY-like protein.
 
 
 0.939
CHU_3216
Two-component response regulator, CheY-like protein.
 
 
 0.938
Your Current Organism:
Cytophaga hutchinsonii
NCBI taxonomy Id: 269798
Other names: C. hutchinsonii ATCC 33406, Cytophaga hutchinsonii ATCC 33406, Cytophaga hutchinsonii str. ATCC 33406, Cytophaga hutchinsonii strain ATCC 33406
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