Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHU_0709 | CHU_0838 | Conserved hypothetical protein (possible metalloprotease). | CHU large protein; uncharacterized. | 0.410 |
CHU_0709 | CHU_0873 | Conserved hypothetical protein (possible metalloprotease). | Similar to large exoproteins involved in heme utilization and adhesion. | 0.531 |
CHU_0709 | CHU_0878 | Conserved hypothetical protein (possible metalloprotease). | CHU large protein; uncharacterized. | 0.533 |
CHU_0709 | CHU_1075 | Conserved hypothetical protein (possible metalloprotease). | CHU large protein; candidate b-glycosidase, glycoside hydrolase family 8 protein. | 0.769 |
CHU_0709 | CHU_1525 | Conserved hypothetical protein (possible metalloprotease). | CHU large protein; possible Rhs family-related protein and SAP-related protein. | 0.787 |
CHU_0709 | CHU_1557 | Conserved hypothetical protein (possible metalloprotease). | CHU large protein; uncharacterized. | 0.780 |
CHU_0709 | CHU_1934 | Conserved hypothetical protein (possible metalloprotease). | CHU large protein; uncharacterized. | 0.782 |
CHU_0709 | CHU_2670 | Conserved hypothetical protein (possible metalloprotease). | Conserved hypothetical protein; Possible outer membrane related protein. | 0.550 |
CHU_0709 | CHU_3119 | Conserved hypothetical protein (possible metalloprotease). | CHU large protein; possible phytase. | 0.703 |
CHU_0838 | CHU_0709 | CHU large protein; uncharacterized. | Conserved hypothetical protein (possible metalloprotease). | 0.410 |
CHU_0838 | CHU_1075 | CHU large protein; uncharacterized. | CHU large protein; candidate b-glycosidase, glycoside hydrolase family 8 protein. | 0.461 |
CHU_0838 | CHU_1525 | CHU large protein; uncharacterized. | CHU large protein; possible Rhs family-related protein and SAP-related protein. | 0.523 |
CHU_0838 | CHU_1557 | CHU large protein; uncharacterized. | CHU large protein; uncharacterized. | 0.770 |
CHU_0838 | CHU_1934 | CHU large protein; uncharacterized. | CHU large protein; uncharacterized. | 0.475 |
CHU_0838 | CHU_2670 | CHU large protein; uncharacterized. | Conserved hypothetical protein; Possible outer membrane related protein. | 0.613 |
CHU_0873 | CHU_0709 | Similar to large exoproteins involved in heme utilization and adhesion. | Conserved hypothetical protein (possible metalloprotease). | 0.531 |
CHU_0873 | CHU_1075 | Similar to large exoproteins involved in heme utilization and adhesion. | CHU large protein; candidate b-glycosidase, glycoside hydrolase family 8 protein. | 0.682 |
CHU_0873 | CHU_1525 | Similar to large exoproteins involved in heme utilization and adhesion. | CHU large protein; possible Rhs family-related protein and SAP-related protein. | 0.710 |
CHU_0873 | CHU_1557 | Similar to large exoproteins involved in heme utilization and adhesion. | CHU large protein; uncharacterized. | 0.802 |
CHU_0873 | CHU_1934 | Similar to large exoproteins involved in heme utilization and adhesion. | CHU large protein; uncharacterized. | 0.755 |
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