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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rcsC-2Sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB. (1093 aa)    
Predicted Functional Partners:
CHU_2080
Sensor histidine kinase/response regulator fusion protein.
 
 
0.960
arcB-11
Multi-sensor hybrid histidine kinase.
 
 
0.958
evgS-3
Sensor histidine kinase/response regulator fusion protein.
 
0.957
CHU_2895
PAS/PAC sensor hybrid histidine kinase.
 
0.952
cheY
Response regulator, CheY-like protein.
 
 
 0.867
phoB
CheY-like response regulator.
 
 
 0.858
cheY-2
Two-component response regulator, cheY-like protein.
 
 
 
 0.786
glnG
Response regulator for gln (sensor glnL) (nitrogen regulator I, NRI).
 
   
 0.782
arcB-12
PAS/PAC sensor signal transduction histidine kinase.
 
 
 
0.768
CHU_1900
Response regulator with Che-like receiver domain.
 
   
 0.759
Your Current Organism:
Cytophaga hutchinsonii
NCBI taxonomy Id: 269798
Other names: C. hutchinsonii ATCC 33406, Cytophaga hutchinsonii ATCC 33406, Cytophaga hutchinsonii str. ATCC 33406, Cytophaga hutchinsonii strain ATCC 33406
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