Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CHU_0703 | glnA | CHU_0703 | CHU_1734 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Glutamine synthetase. | 0.908 |
CHU_0703 | glnA-2 | CHU_0703 | CHU_1735 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Glutamine synthetase. | 0.900 |
CHU_0703 | glnA-3 | CHU_0703 | CHU_2502 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | L-glutamine synthetase. | 0.908 |
CHU_0703 | gltB-2 | CHU_0703 | CHU_3776 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Glutamate synthase (NADH) large subunit. | 0.939 |
CHU_0703 | gltD | CHU_0703 | CHU_3777 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | Glutamate synthase (NADH) small subunit. | 0.912 |
CHU_0703 | yneH | CHU_0703 | CHU_1741 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | L-glutaminase; Belongs to the glutaminase family. | 0.903 |
glmS | glnA | CHU_3838 | CHU_1734 | Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Glutamine synthetase. | 0.927 |
glmS | glnA-2 | CHU_3838 | CHU_1735 | Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Glutamine synthetase. | 0.900 |
glmS | glnA-3 | CHU_3838 | CHU_2502 | Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | L-glutamine synthetase. | 0.927 |
glmS | gltB-2 | CHU_3838 | CHU_3776 | Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Glutamate synthase (NADH) large subunit. | 0.957 |
glmS | gltD | CHU_3838 | CHU_3777 | Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Glutamate synthase (NADH) small subunit. | 0.919 |
glmS | purF | CHU_3838 | CHU_2612 | Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Amidophosphoribosyltransferase. | 0.922 |
glmS | yneH | CHU_3838 | CHU_1741 | Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | L-glutaminase; Belongs to the glutaminase family. | 0.905 |
glnA | CHU_0703 | CHU_1734 | CHU_0703 | Glutamine synthetase. | Delta-1-pyrroline-5-carboxylate dehydrogenase. | 0.908 |
glnA | glmS | CHU_1734 | CHU_3838 | Glutamine synthetase. | Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.927 |
glnA | glnA-2 | CHU_1734 | CHU_1735 | Glutamine synthetase. | Glutamine synthetase. | 0.952 |
glnA | glnA-3 | CHU_1734 | CHU_2502 | Glutamine synthetase. | L-glutamine synthetase. | 0.919 |
glnA | gltB-2 | CHU_1734 | CHU_3776 | Glutamine synthetase. | Glutamate synthase (NADH) large subunit. | 0.978 |
glnA | gltD | CHU_1734 | CHU_3777 | Glutamine synthetase. | Glutamate synthase (NADH) small subunit. | 0.926 |
glnA | purF | CHU_1734 | CHU_2612 | Glutamine synthetase. | Amidophosphoribosyltransferase. | 0.916 |
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