STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arcB-9Response regulator receiver sensor signal transduction histidine kinase. (396 aa)    
Predicted Functional Partners:
arcB-11
Multi-sensor hybrid histidine kinase.
 
 0.964
CHU_2895
PAS/PAC sensor hybrid histidine kinase.
 
0.942
CHU_2080
Sensor histidine kinase/response regulator fusion protein.
 
0.930
CHU_3042
Two-component response regulator.
  
   0.836
rcsC-3
Sensor for ctr capsule biosynthesis; sensor histidine kinase.
 
   0.830
evgS-3
Sensor histidine kinase/response regulator fusion protein.
 
0.812
phoB
CheY-like response regulator.
  
 
   0.805
rcsC-4
Sensor for ctr capsule biosynthesis, probable histidine kinase acting on RcsB.
  
 
   0.794
zraR-2
Response regulator of Zn/Pb responsive two-component regulatory system.
  
   0.774
CHU_3534
Two-component system response regulator.
  
   0.764
Your Current Organism:
Cytophaga hutchinsonii
NCBI taxonomy Id: 269798
Other names: C. hutchinsonii ATCC 33406, Cytophaga hutchinsonii ATCC 33406, Cytophaga hutchinsonii str. ATCC 33406, Cytophaga hutchinsonii strain ATCC 33406
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.