Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CHU_1572 | CHU_3628 | CHU_1572 | CHU_3628 | ABC transporter, permease. | Lipoprotein ABC transporter, permease. | 0.976 |
| CHU_1572 | rlpA | CHU_1572 | CHU_2221 | ABC transporter, permease. | Rare lipoprotein A-like protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.642 |
| CHU_2220 | CHU_2222 | CHU_2220 | CHU_2222 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.593 |
| CHU_2220 | rlpA | CHU_2220 | CHU_2221 | Conserved hypothetical protein. | Rare lipoprotein A-like protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.595 |
| CHU_2222 | CHU_2220 | CHU_2222 | CHU_2220 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.593 |
| CHU_2222 | rlpA | CHU_2222 | CHU_2221 | Conserved hypothetical protein. | Rare lipoprotein A-like protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.792 |
| CHU_3628 | CHU_1572 | CHU_3628 | CHU_1572 | Lipoprotein ABC transporter, permease. | ABC transporter, permease. | 0.976 |
| CHU_3628 | rlpA | CHU_3628 | CHU_2221 | Lipoprotein ABC transporter, permease. | Rare lipoprotein A-like protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.424 |
| CHU_3628 | tpn50 | CHU_3628 | CHU_1561 | Lipoprotein ABC transporter, permease. | Outer membrane protein, OmpA family. | 0.410 |
| CHU_3628 | yiaD-9 | CHU_3628 | CHU_2677 | Lipoprotein ABC transporter, permease. | Possible outer membrane protein. | 0.443 |
| ftsA | rlpA | CHU_2736 | CHU_2221 | Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. | Rare lipoprotein A-like protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.482 |
| ompA-3 | ompA-5 | CHU_0482 | CHU_1710 | Outer membrane protein, OmpA family. | Peptidoglycan-associated lipoprotein, OmpA family. | 0.810 |
| ompA-3 | rlpA | CHU_0482 | CHU_2221 | Outer membrane protein, OmpA family. | Rare lipoprotein A-like protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.420 |
| ompA-3 | tpn50 | CHU_0482 | CHU_1561 | Outer membrane protein, OmpA family. | Outer membrane protein, OmpA family. | 0.832 |
| ompA-3 | yiaD-5 | CHU_0482 | CHU_2008 | Outer membrane protein, OmpA family. | Possible outer membrane protein. | 0.835 |
| ompA-3 | yiaD-9 | CHU_0482 | CHU_2677 | Outer membrane protein, OmpA family. | Possible outer membrane protein. | 0.485 |
| ompA-5 | ompA-3 | CHU_1710 | CHU_0482 | Peptidoglycan-associated lipoprotein, OmpA family. | Outer membrane protein, OmpA family. | 0.810 |
| ompA-5 | rlpA | CHU_1710 | CHU_2221 | Peptidoglycan-associated lipoprotein, OmpA family. | Rare lipoprotein A-like protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.420 |
| ompA-5 | tpn50 | CHU_1710 | CHU_1561 | Peptidoglycan-associated lipoprotein, OmpA family. | Outer membrane protein, OmpA family. | 0.821 |
| ompA-5 | yiaD-5 | CHU_1710 | CHU_2008 | Peptidoglycan-associated lipoprotein, OmpA family. | Possible outer membrane protein. | 0.838 |
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